PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000022.1_g120.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 311aa    MW: 33665.2 Da    PI: 6.254
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000022.1_g120.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like108.24.2e-344296155
                    G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                               kprlrWt eLHerFv+av+qLGG++kAtPk+i+++m+vkgLtl+h+kSHLQkYRl
  Pav_sc0000022.1_g120.1.mk 42 KPRLRWTAELHERFVDAVTQLGGPDKATPKAIMRTMGVKGLTLYHLKSHLQKYRL 96
                               79****************************************************8 PP
2Myb_DNA-binding76.53.5e-244495148
                               TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                               r+rWT+e++e++vdav+qlGg+   t+k+I+rtmg kg+tl+++ks++qky+
  Pav_sc0000022.1_g120.1.mk 44 RLRWTAELHERFVDAVTQLGGPdkaTPKAIMRTMGvKGLTLYHLKSHLQKYR 95
                               89*************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MYSAIHSLPM DGSICGHGEF SGSLDGTNLP GDACLVLTTD PKPRLRWTAE LHERFVDAVT  60
QLGGPDKATP KAIMRTMGVK GLTLYHLKSH LQKYRLGKQS CKDSAENSKD GIAASCIAES  120
QDTGSSSATS SRVMAQDLND GYQVTEALRV QMEVQRRLHE QLEVQRRLQL RIEAQGKYLQ  180
SILEKACKAL NDQAASAAGL EAAKEELSEL AIKVSNDCEG ITPLDTMKMP SLSEIAAALE  240
NRNASNVLAR LGNCSVDSCL TSTGSPVSPM DMSSLAAAMK KRQRPFFGNG DSLPLEGNMR  300
QEVEWMMSNI G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.11e-124G2-like family protein