PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000028.1_g170.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 389aa MW: 42694.8 Da PI: 6.29

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000028.1_g170.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.8	2.2e-33	206	264	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s++prsYYrCt+a C vkk+vers++dp++v++tYeg+H+h+ Pav_sc0000028.1_g170.1.mk 206 LDDGYRWRKYGQKAVKNSPYPRSYYRCTTAACGVKKRVERSSDDPSTVVTTYEGQHTHP 264 59********************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MDGRETGELK TTIDQISMAN STVFSDEIIP GSNFASFASS GGSIFDMSDN NQRGSGFMDL 60 LGFQDFNMPP SLFDFSSSQT TSSSSSMMMV MMPPHHQQQQ QPPLASPAST PTAVALPERE 120 STASEVLNGS TAPTTPNSSS ISSSSNEAAG NKNEDQTTTK AQDEEADEQN QDPEKTQKQL 180 KPKKKNQKRQ REPRFAFMTK SEVDNLDDGY RWRKYGQKAV KNSPYPRSYY RCTTAACGVK 240 KRVERSSDDP STVVTTYEGQ HTHPSPITPR GTMGIAPLPD QPSAFSSSPF GVQQLLPHHH 300 YQQQQQQLQP QYSYIYSSAP SLNISSPGYG GGAFNPSSFS TGLLQERYNF GSPSSSSSAA 360 SNLLRDHGLL QDIVPQIRKE AKEEDHHHQ

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MDGRETGELK TTIDQISMAN STVFSDEIIP GSNFASFASS GGSIFDMSDN NQRGSGFMDL  60
LGFQDFNMPP SLFDFSSSQT TSSSSSMMMV MMPPHHQQQQ QPPLASPAST PTAVALPERE  120
STASEVLNGS TAPTTPNSSS ISSSSNEAAG NKNEDQTTTK AQDEEADEQN QDPEKTQKQL  180
KPKKKNQKRQ REPRFAFMTK SEVDNLDDGY RWRKYGQKAV KNSPYPRSYY RCTTAACGVK  240
KRVERSSDDP STVVTTYEGQ HTHPSPITPR GTMGIAPLPD QPSAFSSSPF GVQQLLPHHH  300
YQQQQQQLQP QYSYIYSSAP SLNISSPGYG GGAFNPSSFS TGLLQERYNF GSPSSSSSAA  360
SNLLRDHGLL QDIVPQIRKE AKEEDHHHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G49520.1	3e-49	WRKY family protein