PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000029.1_g070.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 350aa MW: 39162.2 Da PI: 8.607

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000029.1_g070.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	166.7	8.1e-52	14	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGfrF Ptdeel+v+yL++kv+g +++l ++i+e+d+yk++Pw Lp+k+ +ekewyfFs+rd+ky++g+r+nr++ sgyWk Pav_sc0000029.1_g070.1.mk 14 LPPGFRFYPTDEELLVQYLCRKVAGYQFSL-QIIAEIDLYKFDPWVLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWK 96 79*************************9.89***********7777799************************* PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 atg+dk +++ +g++vg+kk Lvfy g+apkg+kt+W+mheyrl Pav_sc0000029.1_g070.1.mk 97 ATGTDKIITT-EGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRL 139 **9999.999**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGYQ FSLQIIAEID LYKFDPWVLP 60 SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY 120 VGKAPKGTKT NWIMHEYRLI EPSRKNGSTK LDEWVLCRIY KKSSSSAAQK PMTTSVSSKE 180 HSNGSSSSCS SQLDDVLEWL PEIDDRCFTL PRINSLKTLQ QQEDSKLGFQ MGSGNFDWAS 240 LAGLNVVPEL CPNNQPQQGQ GQMNVNYSNN DMYVPSIPPL CHVESPPERL AKTVDEEVQS 300 GFRTQRVDNS GVFQNSNVMP QNFCNPTAPY GYGTRFGRSG LGFGGGEKGK

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MGVPETDPLS QLSLPPGFRF YPTDEELLVQ YLCRKVAGYQ FSLQIIAEID LYKFDPWVLP  60
SKAIFGEKEW YFFSPRDRKY PNGSRPNRVA GSGYWKATGT DKIITTEGRK VGIKKALVFY  120
VGKAPKGTKT NWIMHEYRLI EPSRKNGSTK LDEWVLCRIY KKSSSSAAQK PMTTSVSSKE  180
HSNGSSSSCS SQLDDVLEWL PEIDDRCFTL PRINSLKTLQ QQEDSKLGFQ MGSGNFDWAS  240
LAGLNVVPEL CPNNQPQQGQ GQMNVNYSNN DMYVPSIPPL CHVESPPERL AKTVDEEVQS  300
GFRTQRVDNS GVFQNSNVMP QNFCNPTAPY GYGTRFGRSG LGFGGGEKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27410.2	1e-128	NAC family protein