PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000030.1_g1480.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 246aa    MW: 26918 Da    PI: 5.721
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000030.1_g1480.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183585155
                         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  Pav_sc0000030.1_g1480.1.mk 35 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 85
                                59*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MVKTEQRVQL TETSKPEPSS KTSSTSASSS ACKKKKYKGV RMRSWGSWVS EIRAPNQKTR  60
IWLGSYSTAE AAARAYDAAL LCLKGSSANL NFPSTASSHF IPREITIMSP KSIQRVAAAA  120
ANSFATDNAT TPTTTNIASP PSPPPQSSSS SSLVSSPSMS SSPSNNLLDD DMSSLMGSFE  180
PYTPTYDHHQ QAIDQLPMSS MEPWNNFDDG LQSPKYIDQM FNGAFFDPPM IYDFYEESDI  240
PLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.12e-32ERF family protein