PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000037.1_g500.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 139aa MW: 15588.1 Da PI: 5.6683

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000037.1_g500.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	92.6	3.3e-29	88	137	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ Pav_sc0000037.1_g500.1.mk 88 PRLRWTPQLHLSFVHAVERLGGQDRATPKLVLQLMNVKGLSISHVKSHLQ 137 8************************************************* PP
2	Myb_DNA-binding	48.1	2.6e-15	89	137	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q Pav_sc0000037.1_g500.1.mk 89 RLRWTPQLHLSFVHAVERLGGQdraTPKLVLQLMNvKGLSISHVKSHLQ 137 89**********************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 139 aa Download sequence
MTNEQDYGDQ EENTSEGSSQ LKCSSFDLNK EAGSDNCDDT KFEEFELSVD EDDEKRGRGN 60 INSSTASSAE GNEGRRGKVR QYVRSKMPRL RWTPQLHLSF VHAVERLGGQ DRATPKLVLQ 120 LMNVKGLSIS HVKSHLQVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42660.1	9e-33	G2-like family protein