PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000042.1_g590.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 222aa    MW: 24891.2 Da    PI: 9.6703
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000042.1_g590.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.64.3e-20857255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                               +y+GVr+++ +g+W+AeIrdp   + + +r++lg+f tae Aa a++aa+++++g
  Pav_sc0000042.1_g590.1.mk  8 HYRGVRQRP-WGKWAAEIRDP---N-KaARVWLGTFETAEAAALAYDAAALRFKG 57
                               7********.**********9...3.35***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MGNVRRRHYR GVRQRPWGKW AAEIRDPNKA ARVWLGTFET AEAAALAYDA AALRFKGSKA  60
KLNFPERVQG GTELGYLTTT GSPQDLAAGG SQRTELAHHN QPLSDHQYQL QANPNNVHFT  120
QPDQYAQYFR GGNYENLSYD VLPSTFYERE RSFVSQTLSA TTTTSSSSSS VLFVPSQQED  180
QDQHVQQQHP LSFSMAQQPF GSSSSSSSDP SKKKKDFRQQ QP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61890.13e-22ERF family protein