PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000044.1_g740.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 212aa    MW: 25395.4 Da    PI: 8.9732
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000044.1_g740.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM181.32.5e-5691381129
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksg 81 
                                +ppGfrFhPtdeelv +yL+kkv+++k++l +vi+++d+y++ePwdL++     ++e++ewyfFs++dkky+tg+r+nrat +g
  Pav_sc0000044.1_g740.1.br   9 VPPGFRFHPTDEELVGYYLRKKVASQKIDL-DVIRDIDLYRIEPWDLQErcrIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAG 91 
                                69****************************.9***************953432233667************************* PP

                        NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                +Wkatg+dk+v++ k++l+g++ktLvfykgrap+g+ktdW+mheyrle
  Pav_sc0000044.1_g740.1.br  92 FWKATGRDKSVYD-KTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLE 138
                                *************.999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MMESIESTVP PGFRFHPTDE ELVGYYLRKK VASQKIDLDV IRDIDLYRIE PWDLQERCRI  60
GYEEQNEWYF FSHKDKKYPT GTRTNRATMA GFWKATGRDK SVYDKTKLIG MRKTLVFYKG  120
RAPNGQKTDW IMHEYRLESE QMYNMLIYQN VYQDIIPTKL VHDIQENWLI EISTHQFKLL  180
NIISKPLHSN YCLVMICTPI YYLVTKLKCQ PK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18060.11e-96NAC family protein