PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000067.1_g210.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family G2-like
Protein Properties Length: 123aa    MW: 13670.9 Da    PI: 4.294
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000067.1_g210.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like37.26.5e-1297120225
                    G2-like   2 prlrWtpeLHerFveaveqLGGse 25 
                                prlrWtp+LH +Fv+ave+LGG+e
  Pav_sc0000067.1_g210.1.mk  97 PRLRWTPDLHLAFVHAVERLGGQE 120
                                8*********************97 PP
2Myb_DNA-binding23.11.7e-0798119122
                                TSSS-HHHHHHHHHHHHHTTTT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg 22 
                                r+rWT+++++ +v+av++lGg 
  Pav_sc0000067.1_g210.1.mk  98 RLRWTPDLHLAFVHAVERLGGQ 119
                                89******************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 123 aa     Download sequence    
MAPERIEISD EDDQSSDASF EIQAKNDCLL SSQKCLFFDL NEEASTGDDD QDVSSNEGTQ  60
AVGSRTSPEG NLSCNNTSVE GKERTIAVRQ YVRSKMPRLR WTPDLHLAFV HAVERLGGQE  120
SKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.11e-17G2-like family protein