PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000069.1_g100.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB_related

Protein Properties

Length: 235aa MW: 26466.4 Da PI: 7.6212

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000069.1_g100.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	14	62	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqky 47 rg+WT+ Ed+ l d+++ +G g W++I+++ g gRt++++k++w++ Pav_sc0000069.1_g100.1.mk 14 RGAWTALEDQTLTDYIRAHGDGKWRKIPKEAGriPGRTDNEIKNYWNTT 62 89*********************************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MGRTPCCSKV GLNRGAWTAL EDQTLTDYIR AHGDGKWRKI PKEAGRIPGR TDNEIKNYWN 60 TTLGKKVNCT DQQTKQSSGA VNDNTKKKRN KSTKLPTSTD KTQPSTNIAV RTKALRFNKV 120 PVTLHAQQEA TFPHHADGNH GDLVVKKKAA AANYYSSEQE DTTASEDLML DFDVGELLMS 180 GINNPDSEFW KICHQLDDNN EGSKNYKWTS SHHAPLLFSE EMLKDWMGDD DCFHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09460.1	2e-21	MYB family protein