PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000069.1_g120.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 186aa    MW: 20930.2 Da    PI: 4.9204
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000069.1_g120.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.4e-104272131
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartm 31
                               rg+WT++Ed+ll+d+++ +G g W+++++  
  Pav_sc0000069.1_g120.1.mk 42 RGPWTAQEDKLLADYIRAHGEGKWSSVSKQA 72
                               89**************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MTQTPPPPPP HSRKQCRRDR DRLSLIPIMG RRPCCSKEGV KRGPWTAQED KLLADYIRAH  60
GEGKWSSVSK QADPQQLSKA EDKLSNLPKY NNQNAESECS EGSLSSSSSA TTREEEDYSS  120
HDLWMNFYTR EISLSQFLDT DFSNLSNVFA EVIVGGYSST KAMHDVEADF GAQMAVFTDL  180
ADEWIM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28110.12e-16MYB family protein