PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000071.1_g690.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HSF
Protein Properties Length: 243aa    MW: 27165.5 Da    PI: 9.8484
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000071.1_g690.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.67.5e-37241152102
                                HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS
               HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 
                                Fl+k+y++++d++ +++isw+e+g++fvv+++ +fa+++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++
  Pav_sc0000071.1_g690.1.mk  24 FLTKTYQLVDDPSWDDVISWNESGTTFVVWKTVDFARDMLPKYFKHNNFSSFVRQLNTYGFRKTVPDQ---------WEFANDN 98 
                                9***************************************************************9998.........******* PP

                                XXXXXXXXXXXXXXXXX CS
               HSF_DNA-bind  86 Fkkgkkellekikrkks 102
                                F++g+kell++i+r+ks
  Pav_sc0000071.1_g690.1.mk  99 FRRGQKELLSEIRRRKS 115
                                ***************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MAQRSVPAPF LTLKMAQRSV PAPFLTKTYQ LVDDPSWDDV ISWNESGTTF VVWKTVDFAR  60
DMLPKYFKHN NFSSFVRQLN TYGFRKTVPD QWEFANDNFR RGQKELLSEI RRRKSVTSGT  120
GKVTASEKSG GPSTPSNSGE EMASTSTSSS DSKNPGSVET AAMGQASDLS GENEKLKKEN  180
ENLSSELSQT KKQCDELVRF LMDYLKRTER DEKFGVGVGG TYAKKMKRAE FGAPMMKSGK  240
VCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.14e-70HSF family protein