PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000091.1_g350.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

SBP

Protein Properties

Length: 443aa MW: 48283.4 Da PI: 7.2234

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000091.1_g350.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	78.1	1.4e-24	185	241	2	59
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeek 59 CqvegC+ dls+ak+yhr+h++C hsk+p+v+v+g+e+rfCqqCsr+ el+ fD + Pav_sc0000091.1_g350.1.mk 185 CQVEGCNIDLSSAKDYHRKHRICANHSKSPKVVVDGVERRFCQQCSRM-ELTAFDLNN 241 ***********************************************8.799999664 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MNSVLLMEWN EKPPSLWDLE NLFMFGAKVT DNSKKLQPAD WGIEGERGMN SESFYSTGGD 60 GGSGVSGSDL GDGSSKSSKS ASVSSSVGES KKPNFNLDAF EGFPNDFIHK NESAKAEALG 120 SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVKSSSMAKT KRSKSTGQSA 180 FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVVVDG VERRFCQQCS RMELTAFDLN 240 NERQQMSLVL DQARSVYTRH PSNLTWDGAC SFKFGQTKEY FPKPAKGGGT GGQLNLANNG 300 IPSSITMLYH DSSRLSPSKG TATEVLNRGA EESMISFNLG ATQDFHRALS LLSTSSWVSG 360 EAKPVALDNN TNQNYQNIPQ PGMQAMTQGL PVSSEYWQTQ HLSLNTQEAH VSHSHSNGSN 420 HFQQDLHQFK GPYEFGYQTN QFN

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MNSVLLMEWN EKPPSLWDLE NLFMFGAKVT DNSKKLQPAD WGIEGERGMN SESFYSTGGD  60
GGSGVSGSDL GDGSSKSSKS ASVSSSVGES KKPNFNLDAF EGFPNDFIHK NESAKAEALG  120
SSPTHEVSAG SGEPLLSLKL GKRMYFEDVC AGNNPKSSSL SVKSSSMAKT KRSKSTGQSA  180
FAPHCQVEGC NIDLSSAKDY HRKHRICANH SKSPKVVVDG VERRFCQQCS RMELTAFDLN  240
NERQQMSLVL DQARSVYTRH PSNLTWDGAC SFKFGQTKEY FPKPAKGGGT GGQLNLANNG  300
IPSSITMLYH DSSRLSPSKG TATEVLNRGA EESMISFNLG ATQDFHRALS LLSTSSWVSG  360
EAKPVALDNN TNQNYQNIPQ PGMQAMTQGL PVSSEYWQTQ HLSLNTQEAH VSHSHSNGSN  420
HFQQDLHQFK GPYEFGYQTN QFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	1e-53	SBP family protein