PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000094.1_g530.1.br

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 237aa MW: 27518 Da PI: 9.4673

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000094.1_g530.1.br	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58.3	2.6e-18	10	140	4	128
NAM 4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atk 79 frFhPtd+e++ L k v +++ ++ + ++++ d++ + ePw++ + + + ++++yf ++ ++ + +g+r++r + Pav_sc0000094.1_g530.1.br 10 AFRFHPTDQEIIRSILYKMVVEREplnTTYKGIVHDEDLFGTkEPWKIWEDYGGdqlYDQDLYFLCQLKRLNFSGSRTHRkVGC 93 69****************988887754555679999998779**75333322255689**************5556 PP NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +g Wk+ +k v++ + + +g + L + + ++ ++ W ++ey+l Pav_sc0000094.1_g530.1.br 94 EGSWKEGVASKLVYDGNANPIGRIRQLRYKN--PKSEHHGGWYLDEYSL 140 ***********9999******84..4444599*****97 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MADSRHVSLA FRFHPTDQEI IRSILYKMVV EREPLNTTYK GIVHDEDLFG TKEPWKIWED 60 YGGDQLYDQD LYFLCQLKRL NFSGSRTHRK VGCEGSWKEG VASKLVYDGN ANPIGRIRQL 120 RYKNPKSEHH GGWYLDEYSL FVGDDGHDQT TPGINFVICR LRKNHRSSRL RAGVDKKTNK 180 APQQINESKR KSMNVIINID DEEVPHGCSK NARTRESFRK RGSFFSPEFL SFPTALF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	2e-11	NAC family protein