PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000094.1_g540.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 220aa    MW: 25854.1 Da    PI: 8.5823
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000094.1_g540.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.51.2e-18101404128
                        NAM   4 GfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv.ePwdLpk...kvkaeekewyfFskrdkkyatgkrknr.atk 79 
                                 f+FhPtd+e++   L k v +++    + + ++++ d++ + ePw++ +   + + +++++yf ++ ++ +  ++r++r + +
  Pav_sc0000094.1_g540.1.br  10 AFHFHPTDQEIIRSILYKMVIEREplnPSYHGIVHDEDLFGTkEPWKIWEdygRDQLHDQDLYFLCQLKRINYCSSRTHRrIGR 93 
                                69*****************988887765556679999*998779****74334434477899******9999998988886889 PP

                        NAM  80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +g+W++    k +++ +++ +g  + L + +   ++ + ++W+++eyrl
  Pav_sc0000094.1_g540.1.br  94 EGTWSQRVAAKLIYDGNRNPIGSVRKLRYKN--PKSEHDAEWFLDEYRL 140
                                ***************999***********84..444459********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MANSCNVSLA FHFHPTDQEI IRSILYKMVI EREPLNPSYH GIVHDEDLFG TKEPWKIWED  60
YGRDQLHDQD LYFLCQLKRI NYCSSRTHRR IGREGTWSQR VAAKLIYDGN RNPIGSVRKL  120
RYKNPKSEHD AEWFLDEYRL FVGDDGHDQT SPGFDFVVCR LRKNHNKFDR MRASVHKKTN  180
KAPQQIHERK RKSMNVVINI DDDEEVPHGC SSAKSHSCGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18270.14e-11NAC family protein