PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000095.1_g1360.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 152aa    MW: 17168.3 Da    PI: 6.9073
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000095.1_g1360.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM47.84.7e-15687179
                         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvka...eekewyfFskrdkkyatgkrknratk 79
                                +p+G+rF P++eel+ +yL ++++g++ +   v++++d+y + ePw++ + +++   +++++y F++ +kk+++g+r  r++ 
  Pav_sc0000095.1_g1360.1.br  6 VPVGYRFTPSEEELLLHYLFPRMNGEDYPK-GVVPDCDLYGTkEPWEIWRDFHSspdDQEDIYVFTTLKKKTPNGSRFCRTVG 87
                                599************************999.99*******9879****75333333356688******************755 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MGGYQVPVGY RFTPSEEELL LHYLFPRMNG EDYPKGVVPD CDLYGTKEPW EIWRDFHSSP  60
DDQEDIYVFT TLKKKTPNGS RFCRTVGATG LDKSEVIGDC GSRSFYLRKS SSNHSSNKGG  120
INFFHLLSRS CESKLSSTGG MPCLLTPEFF RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.12e-13NAC family protein