PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000095.1_g1370.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 256aa    MW: 29661 Da    PI: 5.5572
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000095.1_g1370.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM77.43.4e-2471391128
                         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.....kvkaeekewyfFskrdkkyatgkrknra 77 
                                 +p+G++F+P++eel  +yL ++++g++ +   v++++d+y + ePw++ +     + + +++++y F++ +kk+++g+r  r+
  Pav_sc0000095.1_g1370.1.br   7 VPVGYKFRPSEEELFLHYLLPRLNGEDYPK-GVVPDCDLYGTkEPWEIWRdfhhsSPEDDQEDIYVFTTLKKKTPNGSRFCRT 88 
                                 599************************999.99*******9879****6434433223355588******************6 PP

                         NAM  78 tk...sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 +    +g+Wk   + k++ +  g++vg++k + + +  +p+    +W+mhe+++
  Pav_sc0000095.1_g1370.1.br  89 VGaagTGVWKGEDSGKKIRA-CGRVVGIRKRFRYMNPGSPH--DDRWIMHEFQV 139
                                 43344999***********9.99************655555..89*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MGGYYQVPVG YKFRPSEEEL FLHYLLPRLN GEDYPKGVVP DCDLYGTKEP WEIWRDFHHS  60
SPEDDQEDIY VFTTLKKKTP NGSRFCRTVG AAGTGVWKGE DSGKKIRACG RVVGIRKRFR  120
YMNPGSPHDD RWIMHEFQVD ESSLRVRNKE TIVLCLVRKK ETSGKRKLEE GQNHEDVPPC  180
GEIQAQHVHD DQQQHIGPST YDHRRVLEDY LMNDVGDEHD IVNPTLPAQY DQQEHLGTST  240
DDQLARFLED YLVNDV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15500.11e-20NAC family protein