PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000103.1_g1230.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ZF-HD
Protein Properties Length: 206aa    MW: 22525.7 Da    PI: 8.3973
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000103.1_g1230.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer89.53.2e-281163358
                 ZF-HD_dimer  3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58
                                + +Y+eCl+NhAaslG++a+DGCgEf+ +   ++++ +l+CaACgCHRnFHRr + 
  Pav_sc0000103.1_g1230.1.mk 11 NEVYRECLRNHAASLGSYATDGCGEFTLD---DASPGGLQCAACGCHRNFHRRVTY 63
                                678*************************8...6689*****************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MEGDHHDQNT NEVYRECLRN HAASLGSYAT DGCGEFTLDD ASPGGLQCAA CGCHRNFHRR  60
VTYAATSSQA AGGSGRSSGH HHHHNRVIMS SSSRGRDPGD NTIATQDQLM DYNAGGGGSP  120
DSGDRMSGKK RFRTKFTAEQ KEKMLAFAEK LGWKLQRKDL EDEIERFCRS IGVSRQVFKV  180
WMHNHKNLSS SSTSASTGNA SSLTTQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-40ZF-HD family protein