PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000103.1_g480.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 107aa    MW: 11958.2 Da    PI: 7.0706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000103.1_g480.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-093272348
                               -HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                               +W++Ia +++ gRt++++k++w+++l
  Pav_sc0000103.1_g480.1.mk  3 RWSLIAGRLP-GRTDNEVKNYWNTHL 27
                               5*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    
NYRWSLIAGR LPGRTDNEVK NYWNTHLRRK LIQMGVDPNN HRIGHNFGHT KSFGSRINTN  60
DQPSVNSHSS DDPLLDSTSE PESNTSCSAL PDLNLDLTIG LPISLGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.18e-22MYB family protein