PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000107.1_g090.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 103aa    MW: 11868.4 Da    PI: 8.2293
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000107.1_g090.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.81.6e-076997129
                               CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
                        HLH  1 rrrahnerErrRRdriNsafeeLrellPk 29
                               ++ +h  +Er+RR+++ + ++ Lr+ lP 
  Pav_sc0000107.1_g090.1.mk 69 KKIMHRDIERQRRQEMATLYASLRSQLPL 97
                               6789***********************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MENNELFQIS CLPYTEHTTQ ENLALPPTPS QDGRDLSCRP KSGQKHKASI PSSNITFGEI  60
DDENPKGNKK IMHRDIERQR RQEMATLYAS LRSQLPLEYL KVR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51790.17e-14bHLH family protein