PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000107.1_g480.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 239aa    MW: 26883.3 Da    PI: 5.2329
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000107.1_g480.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.82.6e-1859110155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  +++Wv+e+r+p   + k+ r++lg++ tae+Aa+a++ a+++++g
  Pav_sc0000107.1_g480.1.br  59 PVYRGVRRRN-NNKWVCELREP---NkKKSRVWLGTYPTAEMAARAHDVAALAFRG 110
                                68*****887.8******9998...5477************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
MNMFSAQLSD SPDQPESSSF SDASVTTLPA SSSDENVILA SSRPKKRAGR RVFKETRHPV  60
YRGVRRRNNN KWVCELREPN KKKSRVWLGT YPTAEMAARA HDVAALAFRG KLACINFADS  120
AWRLPVPASM DTMDIRRAAA EAAEGFRPAE FGGFSRGSSD EKEINVVMEE KKKNFSVDME  180
ISSSLSLFYL DEEEMFDMPR LIDNMAEGLL LSPPQCLAGY LSWDDMETEA DPKLWSFSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25490.15e-61ERF family protein