PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000107.1_g560.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 240aa    MW: 27308.9 Da    PI: 7.4417
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000107.1_g560.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP249.79e-1659110155
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                + y+GVr++  + +Wv+e r+p++   + r++lg++ tae+Aa+a++ a ++++g
  Pav_sc0000107.1_g560.1.br  59 PVYRGVRRRN-NDKWVCEMREPKKT--KSRIWLGSYPTAEMAARAHDVAELAFRG 110
                                68*****887.8*********9654..4**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    
MNRFFSHFSD SVDQPESSSL SDASVTTLRS SWSDEDVILA SSRPKKRAGR RVFKETRHPV  60
YRGVRRRNND KWVCEMREPK KTKSRIWLGS YPTAEMAARA HDVAELAFRG KLACLNFADS  120
AWRLPVPASM DAMDIRRAAA EAAEGFRPVE FGGVSSSSSD EKERMMVQEE EKKKKVSVKM  180
EKSRSLTSSY WDEEEVFDMP RLLDDMAQGL LLSPPQCLGG YMNWDDMGTD ADVKLWSFSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G51990.12e-55ERF family protein