PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000110.1_g150.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

bZIP

Protein Properties

Length: 452aa MW: 49961.9 Da PI: 8.4385

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000110.1_g150.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.7	3.4e-10	167	207	5	45
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Pav_sc0000110.1_g150.1.mk 167 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 207 788*************************9777777666555 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MGSRTVKTGA NDGNKVVTEM PSFVPPVPTS NPTGTEGSTI RSSRISDFGT LEQTLGFRIE 60 DAVDIGRSPV FNQNKLSSQA LGSSDAQFGS LNKLLPLQKE AQPNLPSVSR SNHENWGESS 120 MADGSPRTDT STDDTEDKNQ RTELNQMTGL LVSDSSDRSK EKPGDQKTLR RLAQNREAAR 180 KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMSGN GALAFDVEYS 240 RWLEEHNRQI NELRAAVNSH AGDTELRTVI DNVIAHYDDI FRLKGTAAKA DVFHILSGMW 300 KTPAERCFMW IGGFRSSELL KLLVNQLEPL TEQQLVGIYN LQQSSQQAED ALSQGMEALQ 360 QSLAETLASG SPGPSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ QTLQQMHRIL 420 TTRQSARALL AINDYFSRLR ALSSLWLARP RE

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MGSRTVKTGA NDGNKVVTEM PSFVPPVPTS NPTGTEGSTI RSSRISDFGT LEQTLGFRIE  60
DAVDIGRSPV FNQNKLSSQA LGSSDAQFGS LNKLLPLQKE AQPNLPSVSR SNHENWGESS  120
MADGSPRTDT STDDTEDKNQ RTELNQMTGL LVSDSSDRSK EKPGDQKTLR RLAQNREAAR  180
KSRLRKKAYV QQLESSRLKL TQLEQELQRA RQQGIFISSS GDQSHSMSGN GALAFDVEYS  240
RWLEEHNRQI NELRAAVNSH AGDTELRTVI DNVIAHYDDI FRLKGTAAKA DVFHILSGMW  300
KTPAERCFMW IGGFRSSELL KLLVNQLEPL TEQQLVGIYN LQQSSQQAED ALSQGMEALQ  360
QSLAETLASG SPGPSGSSGN VANYMGQMAM AMGKLGTLEG FLRQADNLRQ QTLQQMHRIL  420
TTRQSARALL AINDYFSRLR ALSSLWLARP RE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-149	bZIP family protein