PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000119.1_g150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 85aa    MW: 9878.03 Da    PI: 10.2148
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000119.1_g150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.84.1e-212475256
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                               +y+GVr+++ +g++++eIrdps +g  +r +lg+f+taeeAa+a+++a+ +l+g+
  Pav_sc0000119.1_g150.1.mk 24 RYRGVRRRP-WGKFASEIRDPSRQG--ARLWLGTFDTAEEAARAYDRAAFNLRGH 75
                               6********.**********96543..**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MEDPRRGKDL QKQGMEEKGS EEVRYRGVRR RPWGKFASEI RDPSRQGARL WLGTFDTAEE  60
AARAYDRAAF NLRGHLAILN FPNEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23230.14e-29ERF family protein