PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000129.1_g190.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HSF

Protein Properties

Length: 471aa MW: 52809.9 Da PI: 4.7543

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000129.1_g190.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	111.9	4.5e-35	135	225	2	101
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Flkk++++++d+e+++++sws+ +sf+v+d+ ef++++LpkyFkh+nf+SF+RQLn+YgFkkv+ ++ weF+++ Pav_sc0000129.1_g190.1.mk 135 FLKKTFQMVDDPETNSVVSWSAAAQSFIVWDSYEFSRTLLPKYFKHNNFSSFIRQLNTYGFKKVDPDR---------WEFANEG 209 9**************************************************************999.........*** PP XXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkk 101 F+ gkk+ll++ikr+ Pav_sc0000129.1_g190.1.mk 210 FQGGKKHLLKNIKRRI 225 ************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 471 aa Download sequence
MVVPEGCGDD GGRSRLPVSS AIQLPKPSTG LEEAENELNK ATEEVAPAKE EQKAVTFEGG 60 NCDRSSSSSS SPALPKPAKE LFRIKEENTD DVDVDGGDDG NFNGGDGGIF GSFSSSSMAL 120 PKPMEGLHKA GPPPFLKKTF QMVDDPETNS VVSWSAAAQS FIVWDSYEFS RTLLPKYFKH 180 NNFSSFIRQL NTYGFKKVDP DRWEFANEGF QGGKKHLLKN IKRRIRYNKQ PTVGSVDSTK 240 TGLEAEIESL KKDQDFLKLE IMNLRQQQKY SQHQLTAVEQ RIRNSECKNQ RMLFFLTKTG 300 TNPTIVQQLM QKRVIKRELD GSDLRKRRTL PSVQVLESLR DWIDTSLSVD CRSQHEEELG 360 PMLSVHAEQV AEAKVAKQNE TPLPAPMVDK SGNAVQDLKL HVMAGTGTED MPTAYHGMSE 420 NFLEENVVFD DDEFEVDDSN FYQELEDLIG KPHDWSGYLQ RPENEDATAD E

Sequence ? help Back to Top

Protein Sequence Length: 471 aa Download sequence

MVVPEGCGDD GGRSRLPVSS AIQLPKPSTG LEEAENELNK ATEEVAPAKE EQKAVTFEGG  60
NCDRSSSSSS SPALPKPAKE LFRIKEENTD DVDVDGGDDG NFNGGDGGIF GSFSSSSMAL  120
PKPMEGLHKA GPPPFLKKTF QMVDDPETNS VVSWSAAAQS FIVWDSYEFS RTLLPKYFKH  180
NNFSSFIRQL NTYGFKKVDP DRWEFANEGF QGGKKHLLKN IKRRIRYNKQ PTVGSVDSTK  240
TGLEAEIESL KKDQDFLKLE IMNLRQQQKY SQHQLTAVEQ RIRNSECKNQ RMLFFLTKTG  300
TNPTIVQQLM QKRVIKRELD GSDLRKRRTL PSVQVLESLR DWIDTSLSVD CRSQHEEELG  360
PMLSVHAEQV AEAKVAKQNE TPLPAPMVDK SGNAVQDLKL HVMAGTGTED MPTAYHGMSE  420
NFLEENVVFD DDEFEVDDSN FYQELEDLIG KPHDWSGYLQ RPENEDATAD E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	218	224	LKNIKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-78	HSF family protein