PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000130.1_g680.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 280aa    MW: 32165.4 Da    PI: 4.8459
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000130.1_g680.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.14.9e-3054112259
                                --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d +v++itY+ +Hnh+
  Pav_sc0000130.1_g680.1.mk  54 SDSWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSKTDASVLIITYTCSHNHP 112
                                69************************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDETLSPEPD SEVPKELRPE GQASKRRKVV HEKTVVTVKI GTNVGKLKNE GPPSDSWSWR  60
KYGQKPIKGS PYPRGYYRCS TSKGCSAKKQ VERSKTDASV LIITYTCSHN HPGPDVSTTN  120
LTQLQPSTED HNLPALLPKQ EEQEKERDHE QEKERDHEQE QEQDHEQEQE EKQGKLEDHP  180
AMKSDHEDHF HYIQSPIRSS QNIMIDQEED PFLEKTHVSS TLGFLLDEEP LSYSQLMSFS  240
TPKSEENDFF DELEELPTFS SFPSFMRSNL SLERIPSVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.22e-33WRKY family protein