PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000168.1_g110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 255aa    MW: 29058.6 Da    PI: 6.543
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000168.1_g110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM152.32.3e-4741351128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratks 80 
                                lppG+rF Pt+eelv++yL +k++gk+ ++ +vi+ vdiy+ ePwdLpk     +++++++w+fF++r++++a+g r+nr+t+s
  Pav_sc0000168.1_g110.1.mk   4 LPPGYRFYPTEEELVSFYLPNKLQGKRDDTRRVIPVVDIYSQEPWDLPKfsgeLCHGDTEQWFFFTPRQQREAQGGRPNRTTAS 87 
                                79****************************99****************656754445777************************ PP

                        NAM  81 gyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                gyWkatg+   v+s++++++glkkt+vfykg+ap+g+kt+W m+eyr+
  Pav_sc0000168.1_g110.1.mk  88 GYWKATGSPGYVYSSDNKVIGLKKTMVFYKGKAPTGRKTKWKMNEYRA 135
                                **********************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MAELPPGYRF YPTEEELVSF YLPNKLQGKR DDTRRVIPVV DIYSQEPWDL PKFSGELCHG  60
DTEQWFFFTP RQQREAQGGR PNRTTASGYW KATGSPGYVY SSDNKVIGLK KTMVFYKGKA  120
PTGRKTKWKM NEYRAIEADN PTTTTTSTSF PKYLRNEFRL CRVYVVSGSC RAFDRRPLEG  180
GGETKHQLGE SMGGTSTFSL KAPMVEKASS SDETYSYSGE LADLPETSAG INCINWEIIE  240
GFEQPLWEWE QLNLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.15e-89NAC family protein