PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000168.1_g220.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 219aa    MW: 24710.8 Da    PI: 4.1609
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000168.1_g220.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.29.5e-081145135
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevik 35
                               +ppG++F P++eel+ +yL++kv+g++++ e++++
  Pav_sc0000168.1_g220.1.mk 11 VPPGYHFCPSEEELLLYYLRPKVNGEEVPGENHVA 45
                               69************************988766644 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MAEDGYAYDR VPPGYHFCPS EEELLLYYLR PKVNGEEVPG ENHVAKKYVL CLLRKKEEPE  60
KKRKEPEGED SGQVVCLETQ EKRQRMLPCI DNVPSPHPQP QPPENYVFIV ELPVPQSLQP  120
WIDNSPPLAA QVQEETLGQE LLTPCVDFVP SFASEELSIL EWDESLWEPF LLQSVDDVPK  180
PVAVGATMRR DENEVIYTAS TSALPIDCTG HIATQADNP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32770.16e-07NAC family protein