PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000174.1_g1950.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

G2-like

Protein Properties

Length: 635aa MW: 69153.2 Da PI: 6.4234

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000174.1_g1950.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	80.9	1.5e-25	162	212	1	52
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk Pav_sc0000174.1_g1950.1.mk 162 KPRVVWSVELHQQFVGAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQK 212 79*****************.***************************9 PP
2	Myb_DNA-binding	35.7	2e-11	164	212	1	46
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk Pav_sc0000174.1_g1950.1.mk 164 RVVWSVELHQQFVGAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQK 212 678*********************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 635 aa Download sequence
MNLSNGMGSM STASSSGAWK SADVVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVM 60 SADDGKSVVM KGVTHGACDY LIKPVRIEAL KNIWQHVVRK KKNEWKDVEQ SGSVEEGDRQ 120 PKPSEDADYS SSANEGTWKN SKRRKDEEEE ADERDDSSTL KKPRVVWSVE LHQQFVGAVN 180 QLGIDKAVPK KILELMNVPG LTRENVASHL QKNSPCEVVE QKYRLYLRRL SGVSQHPSNL 240 NNSFLSPQEA SFGAMSSLNG LDLQTLAVTG QLPAQSLATL QAGLGRSTAK SGMPMPLVDQ 300 RNLFSFENPK LRFAEGQQHL SSSKPMNLLH GIPTNMEAKQ LANLHQSAQS LGGVNMQVNA 360 HGVQNSALLM QMSQPQSRGQ ILNETSGTHV PRLSSSMGQP ILSNGIPSGV LGRNGIADNG 420 RGAGYNPVQQ NSSMLNFPLN NSSELPGNNF TLGSTPGMSS LTSKGAFPED VNCEIKRSSG 480 FGPSYGIYNE LHQHKSNDWD LQNVGLTFDA SQHTNTMHGS LDSSVLVHQG FSSSQRSAQS 540 RNPSTVGKAM FSIGEGTHHV NVQNNGQHLN SLIVDNTVRV KAERVPDASS QTSFFQEQFG 600 QEDLMSALLK QQQEGIGATE NEFDFDGYSL DNIPV

Sequence ? help Back to Top

Protein Sequence Length: 635 aa Download sequence

MNLSNGMGSM STASSSGAWK SADVVSDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVM  60
SADDGKSVVM KGVTHGACDY LIKPVRIEAL KNIWQHVVRK KKNEWKDVEQ SGSVEEGDRQ  120
PKPSEDADYS SSANEGTWKN SKRRKDEEEE ADERDDSSTL KKPRVVWSVE LHQQFVGAVN  180
QLGIDKAVPK KILELMNVPG LTRENVASHL QKNSPCEVVE QKYRLYLRRL SGVSQHPSNL  240
NNSFLSPQEA SFGAMSSLNG LDLQTLAVTG QLPAQSLATL QAGLGRSTAK SGMPMPLVDQ  300
RNLFSFENPK LRFAEGQQHL SSSKPMNLLH GIPTNMEAKQ LANLHQSAQS LGGVNMQVNA  360
HGVQNSALLM QMSQPQSRGQ ILNETSGTHV PRLSSSMGQP ILSNGIPSGV LGRNGIADNG  420
RGAGYNPVQQ NSSMLNFPLN NSSELPGNNF TLGSTPGMSS LTSKGAFPED VNCEIKRSSG  480
FGPSYGIYNE LHQHKSNDWD LQNVGLTFDA SQHTNTMHGS LDSSVLVHQG FSSSQRSAQS  540
RNPSTVGKAM FSIGEGTHHV NVQNNGQHLN SLIVDNTVRV KAERVPDASS QTSFFQEQFG  600
QEDLMSALLK QQQEGIGATE NEFDFDGYSL DNIPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	1e-162	ARR-B family protein