PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000183.1_g240.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 192aa    MW: 21372.8 Da    PI: 6.1273
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000183.1_g240.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.52e-19555155
                        AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                               ++++GVr+++ +g+Wv+eIr+p        +r++lg+f taeeAaka+++a+  + g
  Pav_sc0000183.1_g240.1.mk  5 KKFRGVRQRH-WGSWVSEIRHP-----LlkRRVWLGTFETAEEAAKAYDEAAILMSG 55
                               59*******9.**********8.....334*********************987765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    
MVQSKKFRGV RQRHWGSWVS EIRHPLLKRR VWLGTFETAE EAAKAYDEAA ILMSGRNAKT  60
NFPVLTNEVS NDHNNNNNNN SSSSSSSALS AILSAKLRKC CKSPSPSLTC LRLDTENSHI  120
GVWQKGAGPR SDSNWLMMVE LDQKGLQPPQ PETSTSALDT EEMAAGQDGG DDRMDDEERV  180
ALQMIEELLN RN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15360.14e-60ERF family protein