PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000195.1_g410.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 145aa    MW: 16957 Da    PI: 4.4085
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000195.1_g410.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.14.4e-20867163
                        NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFsk 63
                               lppGfrFhPtdeelv++yL++k++++++++  +i+e+d+yk++PwdLp+   ++ +++ +F +
  Pav_sc0000195.1_g410.1.mk  8 LPPGFRFHPTDEELVKHYLCRKCQSQPISV-PIIAEIDLYKYNPWDLPAP--TRPNDYVYFDT 67
                               79****************************.88**************943..34455544544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MSSSDLQLPP GFRFHPTDEE LVKHYLCRKC QSQPISVPII AEIDLYKYNP WDLPAPTRPN  60
DYVYFDTSDS VPRLHTDSSC SEHVVSPEFT CEVQSEPKWK EWEKALDFNY NYMDTSVENG  120
FGAQFQTVNQ MSPLQDIFMY LQKPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.16e-36NAC family protein