PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000212.1_g1170.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 373aa MW: 41831.6 Da PI: 7.3778

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000212.1_g1170.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	116.8	2.1e-36	46	188	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......lelee....vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgk 72 lp+G++F+Ptd+el+ e+L++kvegk+ + + +i+ +i++++P++Lp v+ + + +fF++ +k+y+tg+ Pav_sc0000212.1_g1170.1.mk 46 LPAGVKFDPTDQELI-EHLEAKVEGKDtkshplI---DefipTIEGEdGICYTHPEKLP-GVTRDGLSRHFFHRPSKAYTTGT 123 799**********.99*****6665443...133333666646******.555666799********** PP NAM 73 rknratk........sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 rk+r+++ + +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l Pav_sc0000212.1_g1170.1.mk 124 RKRRKIQtecdlqggETRWHKTGKTRPVMV-NGKQKGCKKILVLYtnFGKNRKPEKTNWVMHQYHL 188 73334555544778********.999*******5547999999*******98 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI 60 EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT 120 TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN 180 WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG 240 SGSCSSKEII PPHSHSHSHR EHDQMSAVAS GVAAAAPISS YSAMDIHQLK SDHFSFAPFR 300 KSFDEAQQQH QQQQQQQHHK MGARSASGLE ELIMGCTSSS NVKEESSMPN PQEAEWMKYS 360 SFWPDPDNPD HHG

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MNKSNLGSIR SSDLIDAKLE EHQMCGSKQC PGCGHKLEGK PDWLGLPAGV KFDPTDQELI  60
EHLEAKVEGK DTKSHPLIDE FIPTIEGEDG ICYTHPEKLP GVTRDGLSRH FFHRPSKAYT  120
TGTRKRRKIQ TECDLQGGET RWHKTGKTRP VMVNGKQKGC KKILVLYTNF GKNRKPEKTN  180
WVMHQYHLGQ HEEEKEGELV VSKIFYQTQP RQCNWSDRAS ATTGEGSSDI VPANSRRDSG  240
SGSCSSKEII PPHSHSHSHR EHDQMSAVAS GVAAAAPISS YSAMDIHQLK SDHFSFAPFR  300
KSFDEAQQQH QQQQQQQHHK MGARSASGLE ELIMGCTSSS NVKEESSMPN PQEAEWMKYS  360
SFWPDPDNPD HHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29230.1	1e-146	NAC family protein