PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000220.1_g1030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 200aa    MW: 22965.9 Da    PI: 4.4814
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000220.1_g1030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM57.35.3e-18956149
                         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                                lppGfrFhPtdeel+++yLk++++++++++ ++i+evd+yk++Pw+Lp 
  Pav_sc0000220.1_g1030.1.mk  9 LPPGFRFHPTDEELIMFYLKNQATSRPCPV-SIIPEVDLYKFDPWQLPV 56
                                79****************************.89**************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MEAKHSSELP PGFRFHPTDE ELIMFYLKNQ ATSRPCPVSI IPEVDLYKFD PWQLPVCDIT  60
LLDDWVLCRI YKKRHLGKAY LDQKVEEEDP ITDPKIEITA ANDHEEQMML KFPRTCSITS  120
LLDMDYLAPI SQLLSENSSY DFQNNLASAG NAGHAQMFQF GEMPYQSTTD SAKFQVTQSC  180
PSNQPWFANP VYNFNGLDRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-27NAC family protein