PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000220.1_g1270.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Dof

Protein Properties

Length: 515aa MW: 55216.7 Da PI: 5.8109

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000220.1_g1270.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.4	3.6e-39	152	212	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG +rnvPvG+grrknk+ss Pav_sc0000220.1_g1270.1.mk 152 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGIMRNVPVGAGRRKNKNSS 212 7899******************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 515 aa Download sequence
MSSESEGPTI KLFGKTIPLA LAPLNHEASS AIDESCGAVD SDIAATACGG GVEDYSDDKQ 60 KLSSSATTNS LEGNSTRVDK ETISEKELTA EKQEDDTSEQ ITEDLKAPTT SSGISENPKT 120 PSVDRETSSL KSSNNGDQSE ASCSQEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR 180 HFCKNCQRYW TAGGIMRNVP VGAGRRKNKN SSASQYRHML MSDALQTARA SAANGAHNTT 240 LGSNGTVLTF GSDSPLCESM ASVLNLAEQA QNCTQSGFHR PEQRIGVSSI PGDNRDAHSS 300 GSSITASNSS ERGGKVGLEE PAIKSCQSFP PQVPCFPGSP WPYPWNSAQW PSGMPPPPFC 360 HSGFPISFYP APPYWGCTVP DSWNLPSLSS PSSTLSYCAT SSGPNSPTLG KHSRDGDILN 420 PASSQNEDHV KDNTSDRCVW IPKTLRIDDP SEAAKSSIWA TLGIKNEKGN CTNEGGLFQA 480 FQSKGDEKNH VVEASPVLQA NPAALSRSLN FHERT

Sequence ? help Back to Top

Protein Sequence Length: 515 aa Download sequence

MSSESEGPTI KLFGKTIPLA LAPLNHEASS AIDESCGAVD SDIAATACGG GVEDYSDDKQ  60
KLSSSATTNS LEGNSTRVDK ETISEKELTA EKQEDDTSEQ ITEDLKAPTT SSGISENPKT  120
PSVDRETSSL KSSNNGDQSE ASCSQEKTLK KPDKILPCPR CNSMDTKFCY YNNYNVNQPR  180
HFCKNCQRYW TAGGIMRNVP VGAGRRKNKN SSASQYRHML MSDALQTARA SAANGAHNTT  240
LGSNGTVLTF GSDSPLCESM ASVLNLAEQA QNCTQSGFHR PEQRIGVSSI PGDNRDAHSS  300
GSSITASNSS ERGGKVGLEE PAIKSCQSFP PQVPCFPGSP WPYPWNSAQW PSGMPPPPFC  360
HSGFPISFYP APPYWGCTVP DSWNLPSLSS PSSTLSYCAT SSGPNSPTLG KHSRDGDILN  420
PASSQNEDHV KDNTSDRCVW IPKTLRIDDP SEAAKSSIWA TLGIKNEKGN CTNEGGLFQA  480
FQSKGDEKNH VVEASPVLQA NPAALSRSLN FHERT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	1e-105	Dof family protein