PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000254.1_g030.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 314aa    MW: 34854.8 Da    PI: 4.8172
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000254.1_g030.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY43.37.2e-14981402059
                                S-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY  20 fprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                                  r+YYrCt++   gC ++k+v++++ dp+++++tY+geH+++
  Pav_sc0000254.1_g030.1.mk  98 KKRGYYRCTHRgtqGCLATKQVQKADADPSTIVVTYRGEHTCS 140
                                579*******99999**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MEKRKSMEWE QKTLTSELTQ GKELAKQLMN HLHPSASQEK RDVLISKILF SYERALSLLK  60
RDVGSDGEYN HIPNIMLESP SPMSEISDQD CKNKNVFKKR GYYRCTHRGT QGCLATKQVQ  120
KADADPSTIV VTYRGEHTCS QVLQLARSSA LSLAKQASTG NQNATREAEK PKASQEMSFS  180
FGAGLRVKTE DLDTREDDIF PSFSFPSTPI EPDNVGDHIF CATLMENDLM DGYSPTFASP  240
AATFEPDYLQ AVSPCQMSSF GLGHDYVQTS ESGLSEIISA PTSVTNSPIG DFGFSLDDLD  300
FHHFENTESL AYES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46400.11e-26WRKY family protein