PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000254.1_g1110.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 189aa    MW: 20832.5 Da    PI: 9.851
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000254.1_g1110.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY34.25e-11142163122
                                 ---SS-EEEEEEE--TT-SS-E CS
                        WRKY   1 ldDgynWrKYGqKevkgsefpr 22 
                                 ldDgy+WrKYGqK vk++ +pr
  Pav_sc0000254.1_g1110.1.mk 142 LDDGYRWRKYGQKAVKNNLYPR 163
                                 59*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    
MEGHQEPNYP PPLTPSSLIS LPFLLPPQNP LFTPSSALTA PSSSSQLISP PLLEPQQHQV  60
LPDIDWVSLL SGSPAAGFGG QEINNYKPLV ENNNVGASAE NINEADREGK GANSKRKGGG  120
RTRKPASRPR FAFQTRSADD ILDDGYRWRK YGQKAVKNNL YPRFVNSLSN TIILLLLFCY  180
NLVHHRTKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46130.22e-16WRKY family protein