PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000254.1_g1150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 315aa    MW: 35179.6 Da    PI: 10.6285
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000254.1_g1150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY98.44.7e-31173231259
                                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                  D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+
  Pav_sc0000254.1_g1150.1.mk 173 ADIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNRSDPNMFIVTYTAEHNHP 231
                                 69*************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MAALLGTPYS LEGDRNTNSL WTGETIHVPV TSVKEWGGAP LMKKVGTGRP GLQQQQFQVL  60
FSLPDPIKPR NAIEDLHELY KPFFPKSQPP LSSQITPPPN LSPLTSLTPL TAPKDQTHPI  120
QQHQHQNHYQ QQQQQQQSKP SSHSVSSTTT PRSKKRKNQL KKVCQVPAER LSADIWAWRK  180
YGQKPIKGSP YPRGYYRCSS SKGCMARKQV ERNRSDPNMF IVTYTAEHNH PAPTHRNSLA  240
GSTRQKPFSP QTVTGSDSTK PTSPATSASV DEDPRREYVH SYLHGRAQPP GPNSPQLARR  300
LHPPEALLAA NRHGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.15e-58WRKY family protein