PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000271.1_g210.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family E2F/DP
Protein Properties Length: 153aa    MW: 16602.3 Da    PI: 10.4315
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000271.1_g210.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP63.82.4e-20741211971
                    E2F_TDP  19 kseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                                +s +gi++ln++a++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  Pav_sc0000271.1_g210.1.br  74 SSLDGILDLNNAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 121
                                56679***********...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 153 aa     Download sequence    
MRQITKLSLV IGQLLLAEVV TSPLQTPVSS KVGKANKTSR LTKCSRSGPQ TPAFNVGSPS  60
GANLTPAGPC RFDSSLDGIL DLNNAADTLE VQKRRIYDIT NVLEGIGLIE KKLKNRIQWK  120
GLDVSRTGDV DENYPSLQVR KKVNLLLGML MLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.32e-44E2F/DP family protein