PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000293.1_g290.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 86aa    MW: 9852.91 Da    PI: 4.2484
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000293.1_g290.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26036.31.6e-1114161101
                     DUF260  61 lvyeAearardPvyGavgvilklqqqleqlkaelallkeel 101
                                ++yeA +r++dP+yG+v+++++lqq+l q+++e+a++k+++
  Pav_sc0000293.1_g290.1.mk   1 MFYEASVRVEDPIYGCVKIVSQLQQDLFQAQSEMAKTKAQI 41 
                                57**********************************99986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 86 aa     Download sequence    
MFYEASVRVE DPIYGCVKIV SQLQQDLFQA QSEMAKTKAQ IAFYNAQQQL NQQQQNMVDG  60
VGDNYQQDLH SESSRLGLDD HFYCLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26620.18e-10LBD family protein