PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000299.1_g050.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 506aa MW: 55452.7 Da PI: 6.9666

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000299.1_g050.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.3	8.7e-30	215	274	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt a Cpv+k+v+r+ ed +++++tYeg+Hnh+ Pav_sc0000299.1_g050.1.mk 215 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApACPVRKQVQRCYEDMSILITTYEGTHNHP 274 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MPNSNSRTAP EKKVDESVGY QEIYSQELRE ESELENAKAE MGEVREENAR LKLTLQHMEK 60 DYQSLQCRFF DILRQEASKK ATNVDVGVHR IEEPNQLLSL CLGRSPREPK NEETNTTNFT 120 KLVQVDHEDL NANLTLGLGN SKLMELPMEL VRSQKPEETS LEEPKDHSEA GAGESLPPSS 180 KTPKTTRNED DDVPQQANAK RARVSVRVRC DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR 240 CTVAPACPVR KQVQRCYEDM SILITTYEGT HNHPLPFTAS SMASTTAAAA SMLLSGSSTS 300 QPGFGSTATL LNGSDFGVFD SSRTNQLYLP KSSNPLLPTI TLDLTASPSS SPIHLNRLSS 360 SFASACTFPS SLSFCSSESN ISPNSRGNGY LKYGSLPFDK GSFNLDQPYA EKNHQSSSQV 420 SLTESLTKAI TSDPNFKSVI AVALSSMVGG GAATHRNQGE GERLGHHLKW CEAAHQFTSH 480 NPLIQNGKGC STPSIFNRLS SSDSQK

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MPNSNSRTAP EKKVDESVGY QEIYSQELRE ESELENAKAE MGEVREENAR LKLTLQHMEK  60
DYQSLQCRFF DILRQEASKK ATNVDVGVHR IEEPNQLLSL CLGRSPREPK NEETNTTNFT  120
KLVQVDHEDL NANLTLGLGN SKLMELPMEL VRSQKPEETS LEEPKDHSEA GAGESLPPSS  180
KTPKTTRNED DDVPQQANAK RARVSVRVRC DTPTMNDGCQ WRKYGQKIAK GNPCPRAYYR  240
CTVAPACPVR KQVQRCYEDM SILITTYEGT HNHPLPFTAS SMASTTAAAA SMLLSGSSTS  300
QPGFGSTATL LNGSDFGVFD SSRTNQLYLP KSSNPLLPTI TLDLTASPSS SPIHLNRLSS  360
SFASACTFPS SLSFCSSESN ISPNSRGNGY LKYGSLPFDK GSFNLDQPYA EKNHQSSSQV  420
SLTESLTKAI TSDPNFKSVI AVALSSMVGG GAATHRNQGE GERLGHHLKW CEAAHQFTSH  480
NPLIQNGKGC STPSIFNRLS SSDSQK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	1e-87	WRKY family protein