PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000299.1_g100.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 193aa    MW: 21508.2 Da    PI: 9.4608
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000299.1_g100.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.34.6e-14951361155
                        AP2  11 krgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 +grW+A+I   +   g +k+ +lg++gt eeAa+a++ a+ +++g
  Pav_sc0000299.1_g100.1.br  95 HNGRWEARIGRvF---G-NKYLYLGTYGTQEEAARAYDIAAIEYRG 136
                                48******99966...3.6*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MPAQDYYKRE PTQRSLKQEP SPKTQHFPSK TLSASLKLQA STMASLILGA LPIPTQTLAF  60
SSRISHFIYS ELFQSSTASL SVSTATSPSV PLGHHNGRWE ARIGRVFGNK YLYLGTYGTQ  120
EEAARAYDIA AIEYRGINAV TNFDLSSYIR WLKPRADDPI ATQEPETASE YAIHGQQLHP  180
NRGVFLTHKS FCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.24e-26ERF family protein