PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000311.1_g1150.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 197aa    MW: 21948 Da    PI: 4.8918
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000311.1_g1150.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding315.9e-102854228
                                SSS-HHHHHHHHHHHHHTTTT-HHHHH CS
             Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIa 28
                                + WT+eEd++l+++v+ +G g+W+tI 
  Pav_sc0000311.1_g1150.1.mk 28 NLWTPEEDLILKKYVETHGEGNWATIV 54
                                56***********************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    
MDKKRSSSSV VTWKTAAANA NAQAPKKNLW TPEEDLILKK YVETHGEGNW ATIVTNKKKK  60
NKISTTTTTC IDRTDDDHDQ IQKKDATDFD HDHDHRQEPN GSNPTSSASC YYYDINDMVE  120
SPIFTSHHDC LQYLPTNLNA TFLFDHDEPF IAADAASSSS YFDSFLFFEA FGSSAAATAA  180
DMESVSPLAC ADHHLGW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52600.12e-09MYB family protein