PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000314.1_g340.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 102aa    MW: 11481.3 Da    PI: 7.1838
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000314.1_g340.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B333.38.8e-1119783797
                               EEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE.E-SS.SEE..EEEEE CS
                         B3 37 tledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk.ldgr.sefelvvkvf 97
                               t+ + +g+ We+ +   ++s    l ++Wk F+ +n+Lk+gD +vF+ l+ + ++  ++v+++
  Pav_sc0000314.1_g340.1.mk 19 TVLTFRGKNWEMIY--HGSSIYKRL-DNWKAFAIDNNLKVGDACVFEqLECSsMRLVFRVQIL 78
                               567789********..777655555.5********************6555446665556555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MNVVPGKFSA TLPSCSIPTV LTFRGKNWEM IYHGSSIYKR LDNWKAFAID NNLKVGDACV  60
FEQLECSSMR LVFRVQILRG DIPSKFLDKL DGDNVDAPVV LE