PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000323.1_g400.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family AP2
Protein Properties Length: 219aa    MW: 23914.4 Da    PI: 5.3669
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000323.1_g400.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP223.21.8e-071201521855
                        AP2  18 eIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                e+rd      + k+++lg f+ta  Aa+a+++a+ k++g
  Pav_sc0000323.1_g400.1.mk 120 EVRD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 152
                                5677......55************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MLDLNLNVVS SGPNEVESCG TQMDESGTSN SSVVNADASS TNDDSCSTRA ARYDAVTTFN  60
FDILKVRGGE DEDDVVVTKE LFPVTGGLSN WPGQGQSSAS SSLVRKNLME LGFDHGGSGE  120
VRDCGKQVYL GGFDTAHAAA RAYDRAAIKF RGVDADINYN LSDYEEDLKQ MKNLTKEEFV  180
HILRRQSTGF SRGSSRYRGV TLHKCGRWEA RMGQFLGKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.23e-58AP2 family protein