PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000323.1_g720.1.br
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 160aa    MW: 18619.2 Da    PI: 5.8134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000323.1_g720.1.brgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM545.6e-17101363122
                        NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpkkvka...eekewyfFskrdkkyatgkrknr 76 
                                 GfrF+Ptd+e++ ++L k v +++      + ++vi+e+++  +k eP+++ + + +   +++++yf s+ ++   +g r +r
  Pav_sc0000323.1_g720.1.br  10 LGFRFDPTDQEIIGFFLYKMVVANNpltlmPPYNKVIHECNLfgNKREPSEIWRDYGGdqlDDQDLYFVSELQR---NGLRIQR 90 
                                6*******************8888878886666778****9833577*****7533322236668888888776...6889999 PP

                        NAM  77 atk.sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWv 122
                                +t   g+W++t + ++v+++ +e +g k+ + + +g++++  ++ W+
  Pav_sc0000323.1_g720.1.br  91 KTGrCGTWSETETYQDVKDEVDEIIGRKRKFRYENGNTSE-DHAGWL 136
                                55438***************99***********9988877.678886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
MANSGVTQLL GFRFDPTDQE IIGFFLYKMV VANNPLTLMP PYNKVIHECN LFGNKREPSE  60
IWRDYGGDQL DDQDLYFVSE LQRNGLRIQR KTGRCGTWSE TETYQDVKDE VDEIIGRKRK  120
FRYENGNTSE DHAGWLWMNI AFSKRAARIA QVIMAMILTL