PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000326.1_g420.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 546aa MW: 59639.6 Da PI: 6.3769

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000326.1_g420.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94	1.1e-29	313	371	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ kg+++pr+YYrCt+ gCpv+k+v+r+aed +++++tYeg+Hnh+ Pav_sc0000326.1_g420.1.mk 313 SDGCQWRKYGQKMAKGNPCPRAYYRCTMGtGCPVRKQVQRCAEDRTILVTTYEGHHNHP 371 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MESAASDHSI HNCRSIERPL LSPETAVDHD NHGKRIVDEL DFFADNKGRL MEMRDQTVEV 60 KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHTMED KHRTNELAVL 120 QAELGRMSVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHQMINNGSV 180 VLEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPQN DIVESMEFCK 240 STSHVLHRDL SGRISTTNGG EDSPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR 300 VSVRARSDAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL 360 VTTYEGHHNH PLPAAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL 420 ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MMSVPQILGQ ALSSQSKFSV 480 LDSFQGLDSA THSLADKVNA ATAAVTADPN FTAALVAAIT SIIGNVHSNN NTNNNITTRN 540 NSDSNT

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MESAASDHSI HNCRSIERPL LSPETAVDHD NHGKRIVDEL DFFADNKGRL MEMRDQTVEV  60
KEEGAHDHHG VGQEKQLPDV NTGLNLLTTY TSSDKSSMDD GTSSSHTMED KHRTNELAVL  120
QAELGRMSVE NQRLRVMISQ VNNNYQALQV QIVTLMQRQQ NQKADHQTPE QHQMINNGSV  180
VLEEKQMMNG FNHIVPRQFM DMGRAEKDEL SQCSLEGCRS QDCSGSPPQN DIVESMEFCK  240
STSHVLHRDL SGRISTTNGG EDSPDQEFQG WVPKKVSKMM SPRDVDQASS ETMSMIKKAR  300
VSVRARSDAS MISDGCQWRK YGQKMAKGNP CPRAYYRCTM GTGCPVRKQV QRCAEDRTIL  360
VTTYEGHHNH PLPAAAMAMA STTSAAASML LSGSMPSADG LISSNSFLAR SALPNCPPSL  420
ATLSASAPFP TVTLDLTRTP TSSEMPLGQP NQLPPSFPQN MMSVPQILGQ ALSSQSKFSV  480
LDSFQGLDSA THSLADKVNA ATAAVTADPN FTAALVAAIT SIIGNVHSNN NTNNNITTRN  540
NSDSNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-106	WRKY family protein