PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pav_sc0000334.1_g570.1.mk

Organism

Prunus avium

Taxonomic ID

42229

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CAMTA

Protein Properties

Length: 1138aa MW: 127364 Da PI: 5.6112

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pav_sc0000334.1_g570.1.mk	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	185.2	6.8e-58	21	136	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYa 86 e ++rwl++ ei++iL nf+k+++++e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLKvg+v+vl+cyYa Pav_sc0000334.1_g570.1.mk 21 EaQHRWLRPAEICEILSNFQKFHISSEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYA 104 449******************************************************************************* PP CG-1 87 hseenptfqrrcywlLeeelekivlvhylevk 118 h+een++fqrr+yw+Le++l +iv+vhylevk Pav_sc0000334.1_g570.1.mk 105 HGEENENFQRRSYWMLEQDLMHIVFVHYLEVK 136 ***************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 1138 aa Download sequence
MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML 120 EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT 180 SPSSNLTSCE DADSGDSRQA SSFHSSFDSQ QMGNGPLTDK ADINLSLHPH WNNHDGQSSF 240 HGGNYRPYFE KDQHCYSDDS TCGIDSQKTL GVGSWEEILE QCSTGLHTVT SHGSKSSIQF 300 ASAGIPPEQQ NITSTELLAG NSTLKEEFGS SLPFRTNWQI LEDISLYVHV GCCSLSVTLN 360 FYVQTSKTAE IPLEENALQL PKWPLDQSMN LQLPSNLDTR LFEQGTVDVN LRNAPELVTT 420 HPNQQNDQLV QNNFQAQLTN AESQCLIISS SEPDIPKDGN INYAFTLRQQ LLDREEGLKK 480 VDSFSRWVSK ELGEVDDLQM QSSSGISWST DECGNVADDS SLSPSISQDQ LFSIVDFSPK 540 WAYTDSEIEV LVIGTFLVSQ KEITKYNWSC MFGEVEVPAQ VLANGVLFCF APPHSAGQVP 600 FYVTCSNRLA CSEVREFDYQ VGSTKDLDIT NICNGTTNEI HLHLRLESLL SLRSVSPSGQ 660 LVEGVKEKQN LISKIISLKE EEEYLPLVEP TVVNDLLQHE GMENLIKLMK EKLYTWLLHK 720 AIEDGKGPSV LDSEGQGVIH LAAALGYDWA IKPIVTAGVS INFRDVNGWT ALHWAAIYGR 780 QGHQDLPILF YFNLALEYLE QTVAILISLG AAPGALTDPS PEFPLGRAPA DLASVNQHKG 840 ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIKAVKTFS ERIATPGSYS DMSDALSLKD 900 SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEFGMP DERAISLIAS KSHKVGPVNG 960 YTHTAAIQIQ KKFRGWKKRK EFLIIRQRIV KIQAHVRGHQ VRKQYKAITW SVGILEKVIL 1020 RWRRKGTGLR GFRPDAVAKA SNPQSVPSKD DDYDFLKKGR KQTEERLQKA LTRVKSMVQY 1080 PEGRAQYRRL LNVVEGFRET KVSEMAMDGS ELKVEGGDDL IDIDKLLDDD TFMSIAFD

Sequence ? help Back to Top

Protein Sequence Length: 1138 aa Download sequence

MAERGSYSQG PRLDFQQLLG EAQHRWLRPA EICEILSNFQ KFHISSEPPN RPPSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHEK LKVGSVDVLH CYYAHGEENE NFQRRSYWML  120
EQDLMHIVFV HYLEVKGNRA NAGGIREIDE VTPDLQKGSS WTSSPSNSNC RTPSGNTDYT  180
SPSSNLTSCE DADSGDSRQA SSFHSSFDSQ QMGNGPLTDK ADINLSLHPH WNNHDGQSSF  240
HGGNYRPYFE KDQHCYSDDS TCGIDSQKTL GVGSWEEILE QCSTGLHTVT SHGSKSSIQF  300
ASAGIPPEQQ NITSTELLAG NSTLKEEFGS SLPFRTNWQI LEDISLYVHV GCCSLSVTLN  360
FYVQTSKTAE IPLEENALQL PKWPLDQSMN LQLPSNLDTR LFEQGTVDVN LRNAPELVTT  420
HPNQQNDQLV QNNFQAQLTN AESQCLIISS SEPDIPKDGN INYAFTLRQQ LLDREEGLKK  480
VDSFSRWVSK ELGEVDDLQM QSSSGISWST DECGNVADDS SLSPSISQDQ LFSIVDFSPK  540
WAYTDSEIEV LVIGTFLVSQ KEITKYNWSC MFGEVEVPAQ VLANGVLFCF APPHSAGQVP  600
FYVTCSNRLA CSEVREFDYQ VGSTKDLDIT NICNGTTNEI HLHLRLESLL SLRSVSPSGQ  660
LVEGVKEKQN LISKIISLKE EEEYLPLVEP TVVNDLLQHE GMENLIKLMK EKLYTWLLHK  720
AIEDGKGPSV LDSEGQGVIH LAAALGYDWA IKPIVTAGVS INFRDVNGWT ALHWAAIYGR  780
QGHQDLPILF YFNLALEYLE QTVAILISLG AAPGALTDPS PEFPLGRAPA DLASVNQHKG  840
ISGFLAESSL TSYLDSLTMN DAKEGGAAEI SGIKAVKTFS ERIATPGSYS DMSDALSLKD  900
SLTAVTNATQ AADRIHQMFR MQSFDRRQLT EYDTDEFGMP DERAISLIAS KSHKVGPVNG  960
YTHTAAIQIQ KKFRGWKKRK EFLIIRQRIV KIQAHVRGHQ VRKQYKAITW SVGILEKVIL  1020
RWRRKGTGLR GFRPDAVAKA SNPQSVPSKD DDYDFLKKGR KQTEERLQKA LTRVKSMVQY  1080
PEGRAQYRRL LNVVEGFRET KVSEMAMDGS ELKVEGGDDL IDIDKLLDDD TFMSIAFD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64220.2	0.0	CAMTA family protein