PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000348.1_g610.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 956aa    MW: 107896 Da    PI: 8.7635
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000348.1_g610.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.33.7e-10241081099
                                HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                         B3  10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92 
                                vl+++ l +p + ++++g     + t+ l+ +++ +W v l   k+ g+++l++GW++F++   L  g +++F+++g  s f  
  Pav_sc0000348.1_g610.1.mk  24 VLSKDVLKFPESVVTKYGDC--LGDTVFLKVPNSAVWPVGL--IKRNGQVWLQQGWSNFADFYSLAFGYVLLFSYEGLhSHF-- 101
                                57788899999999999755..6679***************..888899**************************9876777.. PP

                                EEEEE-S CS
                         B3  93 vvkvfrk 99 
                                 v++f +
  Pav_sc0000348.1_g610.1.mk 102 QVRIFMR 108
                                8888765 PP
2B338.71.8e-12154240899
                                -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                         B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                                + +l+ g+l +p   + ++g       t  +e ++g  W ++l  +++++++ l++GW eF+k+  L++g f+vF++ g+ s f
  Pav_sc0000348.1_g610.1.mk 154 ERTLQDGMLEIPIIAVHTYGDY--IADTAYFEVPDGSIWPIEL--TRRDREICLGRGWPEFAKSYSLEDGCFLVFSYAGKcSHF 233
                                4566778899999999888655..4458***************..********************************9966666 PP

                                ..EEEEE-S CS
                         B3  91 elvvkvfrk 99 
                                   +++frk
  Pav_sc0000348.1_g610.1.mk 234 --QLRIFRK 240
                                ..9999987 PP
3B3512.7e-16319413598
                                -..-HHHHTT-EE--HHH.HTT...---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEE CS
                         B3   5 ltpsdvlksgrlvlpkkfaeeh...ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvF 82 
                                + ps+vl++  l+++ +f+ +h   +    ++  +tl+ ++ ++W+ ++ ++ + g+    +   GW+ Fv++n+L+egD +vF
  Pav_sc0000348.1_g610.1.mk 319 MQPSYVLNH--LRISSSFVMKHilsD----GECNVTLQISDKKTWSARCMIDVYCGQlcaRLHHHGWQAFVRDNQLEEGDACVF 396
                                445566655..9**********6432....33479999999********987777774435566******************** PP

                                EE-SS.SEE..EEEEE- CS
                         B3  83 kldgr.sefelvvkvfr 98 
                                +l+++  + +l+v++fr
  Pav_sc0000348.1_g610.1.mk 397 ELIEKaPKIKLRVRIFR 413
                                ***988*********98 PP
4B350.14.8e-16490593199
                                EEEE-..-HHHHTT-EE--HHH.HTT...---..--SEEEEEE.TTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh...ggkkeesktltled.esgrsWevkliy...rkksgryvltkGWkeFvkangLkeg 77 
                                ff   ++ ++l+++ l ++ +fa+++    g+  +  ++tl+   + rsW vk+i    +++s++ +   GW  Fvk+n+L+eg
  Pav_sc0000348.1_g610.1.mk 490 FFVMKMHLSYLSTH-LPISVPFANKYicaRGV-SS--DVTLQIsNDERSWPVKCITtvyNGSSRTSFHNFGWGAFVKDNHLEEG 569
                                66667788999998.9**********997555.34..4555542688*******767768888889999*************** PP

                                -EEEEEE-.SS.SEE..EEEEE-S CS
                         B3  78 DfvvFkld.gr.sefelvvkvfrk 99 
                                D +vF+l+ +  ++  ++v++fr+
  Pav_sc0000348.1_g610.1.mk 570 DACVFELInKGpDKIAFKVGIFRT 593
                                ******994445666778888875 PP
5B343.46e-145936711799
                                E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                ++p  fa++h  k  ++   +l+ ++g +W+v + y k   + ++++GW+ Fv++n+Lk gD++vF l+++ + ++ v +fr+
  Pav_sc0000348.1_g610.1.mk 593 TVPTGFAKRHLTK--QTANAILKVSDGGTWSVMFAYPKL--KATFQQGWRVFVRDNNLKLGDVCVFILIKDIKLSFEVVFFRA 671
                                6899******544..4557999************55444..4779***********************999777778888775 PP
6B356.26.5e-186947751498
                                T-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  14 grlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                  l +p +fa++h    k++   ++l+ ++gr+W v+++y+++  r  +++GW+ F+++n+Lk+gD++vF l++r+e+ l v +
  Pav_sc0000348.1_g610.1.mk 694 YTLQFPHPFARQHlV--KQSAGNIILKILDGRTWPVEFKYENSMAR--FQNGWSAFARDNNLKVGDVCVFVLIDRNERLLEVVF 773
                                56789********53..445558***************77777655..9************************99777677776 PP

                                E- CS
                         B3  97 fr 98 
                                +r
  Pav_sc0000348.1_g610.1.mk 774 YR 775
                                66 PP
7B350.24.6e-168759561599
                                -EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3  15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                                 l +p  fa+++ +   +++t+tl+  + rsW+v+li + k ++  l++GW  F+ +n L+ gD+++F+l++r++  l+v++fr
  Pav_sc0000348.1_g610.1.mk 875 SLHVPVGFARSFVKR--RKQTVTLQV-RERSWRVNLIGWTKESSAKLSGGWPAFATENCLRGGDVCMFELIERNDIVLKVHIFR 955
                                5889*****999644..555777655.88********9**********************************99999*****99 PP

                                S CS
                         B3  99 k 99 
                                +
  Pav_sc0000348.1_g610.1.mk 956 H 956
                                6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 956 aa     Download sequence    
MGSSSRHGKG LAFPVDSRSF FKIVLSKDVL KFPESVVTKY GDCLGDTVFL KVPNSAVWPV  60
GLIKRNGQVW LQQGWSNFAD FYSLAFGYVL LFSYEGLHSH FQVRIFMRSP LEIDYFGSSV  120
KEEHNLNGEM DYSNSSESPA SLVNAPSFFK IILERTLQDG MLEIPIIAVH TYGDYIADTA  180
YFEVPDGSIW PIELTRRDRE ICLGRGWPEF AKSYSLEDGC FLVFSYAGKC SHFQLRIFRK  240
NTLEMEYNSS SDDTEGNSNT SGDQTEGEKR THGGDGGKTA SHRSSEVDLR TAKLESLKGR  300
AFAKASSFKY DNPFTVIRMQ PSYVLNHLRI SSSFVMKHIL SDGECNVTLQ ISDKKTWSAR  360
CMIDVYCGQL CARLHHHGWQ AFVRDNQLEE GDACVFELIE KAPKIKLRVR IFRDKDQEQE  420
RGQRPCISIE HSISKLPQDC RSAGSSRWEA CADHGGKSTA SEAPLRTFAK TELEDLAYSK  480
ALSFKSNNPF FVMKMHLSYL STHLPISVPF ANKYICARGV SSDVTLQISN DERSWPVKCI  540
TTVYNGSSRT SFHNFGWGAF VKDNHLEEGD ACVFELINKG PDKIAFKVGI FRTVPTGFAK  600
RHLTKQTANA ILKVSDGGTW SVMFAYPKLK ATFQQGWRVF VRDNNLKLGD VCVFILIKDI  660
KLSFEVVFFR ATEAANCSLP PGRPWQRSNE KQGYTLQFPH PFARQHLVKQ SAGNIILKIL  720
DGRTWPVEFK YENSMARFQN GWSAFARDNN LKVGDVCVFV LIDRNERLLE VVFYRTNEAE  780
DCPLSPGLGG GAIDQVEKRR SPINKVETGR TTICENGVSC SLDPSLEIGR YKGLKTDEQI  840
TQRPLNSSST ALEAANRFIP KNPSFRATLG PTYQSLHVPV GFARSFVKRR KQTVTLQVRE  900
RSWRVNLIGW TKESSAKLSG GWPAFATENC LRGGDVCMFE LIERNDIVLK VHIFRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-18B3 family protein