PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000348.1_g620.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 541aa    MW: 61468.1 Da    PI: 7.4347
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000348.1_g620.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.91.2e-1521115199
                                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                                ffk+ ++ ++++ + l++pk+f+ ++g +  +++ l l + sg  W+v l  r+ +g++++ kGW +F +   L+ g  +vF +
  Pav_sc0000348.1_g620.1.mk  21 FFKIILKGNTSSDAKLRIPKNFVMKYGDDLSNPVSLELPSGSGSAWKVDL--RRLDGEVWFDKGWADFSEFYSLDRGHWLVFGY 102
                                899999999999**************8888899999**************..******************************** PP

                                -SSSEE..EEEEE-S CS
                         B3  85 dgrsefelvvkvfrk 99 
                                +g+s+f   v +f++
  Pav_sc0000348.1_g620.1.mk 103 QGNSKF--QVCIFDR 115
                                **9999..9999997 PP
2B3474.7e-15242325694
                                ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                         B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 
                                +++++ +  +l+lp +f + + +k  +s +++l+ ++ r+W v+l+y  ++gr  + +GW +Fv +n+Lk++D++ F+ ++ ++
  Pav_sc0000348.1_g620.1.mk 242 MKPSYITGFLLWLPSEFHKLYPIK--NSGEVILRVLDHRTWPVNLKY--GGGRAQFLSGWMDFVCDNNLKVNDVCAFESID-NK 320
                                5778888899********999877..4559***************55..555544557********************776.44 PP

                                E..EE CS
                         B3  90 felvv 94 
                                 ++++
  Pav_sc0000348.1_g620.1.mk 321 VKPLF 325
                                44555 PP
3B349.57.4e-16440521186
                                EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                                ffkv ++ ++  ++++ +p +f+++h +++  +  + l+ +  r+W vkl  +++ gr  +++GW +F+++n L  gD+++F l
  Pav_sc0000348.1_g620.1.mk 440 FFKVAMRTSYIHNRNMNVPYTFVKKHLKQT--NNYVFLRVSGARTWCVKL--CQYVGRAKFQGGWPKFARENSLVKGDVCIFVL 519
                                888988888899999***********6553..44788888888*******..999999************************98 PP

                                -S CS
                         B3  85 dg 86 
                                ++
  Pav_sc0000348.1_g620.1.mk 520 VN 521
                                75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MASLPQEIDD WPTFSPTTPH FFKIILKGNT SSDAKLRIPK NFVMKYGDDL SNPVSLELPS  60
GSGSAWKVDL RRLDGEVWFD KGWADFSEFY SLDRGHWLVF GYQGNSKFQV CIFDRTCTEI  120
DYPLRKQEME ETDDTDDDFH EDSGDDSVEE QPDDSTCPRK TRKKSSLPCP RPQKKNRTSS  180
RGKDDYPAKL GSGSTSSTRR FEKRTPGFLG GIRPLPESRN AIALQRANAY KSQHPFSVIV  240
AMKPSYITGF LLWLPSEFHK LYPIKNSGEV ILRVLDHRTW PVNLKYGGGR AQFLSGWMDF  300
VCDNNLKVND VCAFESIDNK VKPLFDVVIF PNIEAANCPN EREQTVPEIE ETNEDDDPSD  360
DSSDESGDAD YLSDDSDNDS VEIIENCTPF PRRTKEKSPM PCPQPPKKNK ASSSGKVYFP  420
ASGNATALQR ANAFKSRHPF FKVAMRTSYI HNRNMNVPYT FVKKHLKQTN NYVFLRVSGA  480
RTWCVKLCQY VGRAKFQGGW PKFARENSLV KGDVCIFVLV NSIKPLFDVV FYHTRDSTTT  540
N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.13e-35B3 family protein