PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000348.1_g630.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 154aa    MW: 17595.5 Da    PI: 11.2174
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000348.1_g630.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.63.4e-16731451490
                                T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS
                         B3  14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 
                                 r+  p +f++eh ++   + + +l+ ++ r+W v+l  +k+++++ l+  W +Fv++n+Lk+gD++vF+l+++ +  
  Pav_sc0000348.1_g630.1.mk  73 YRMASPAEFVKEHLNQA--HDKAILRVSDERTWHVNL--CKYGRAFRLQ-RWMRFVRENDLKVGDVCVFELINNiKPL 145
                                5677799******5553..337999************..**********.9*******************99875544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 154 aa     Download sequence    
MLLRSGKVDF PAKRHGGGKS ITARFPKRTE PILGRLHPST TSGKAIALQR AKALKSDNSF  60
FMVSMGRTNI DGYRMASPAE FVKEHLNQAH DKAILRVSDE RTWHVNLCKY GRAFRLQRWM  120
RFVRENDLKV GDVCVFELIN NIKPLFNVAL FHAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.14e-09B3 family protein