PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pav_sc0000350.1_g1100.1.mk
Organism
Prunus avium
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 213aa    MW: 24730.5 Da    PI: 5.4205
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pav_sc0000350.1_g1100.1.mkgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.53.9e-17864150
                         NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........k 50
                                +ppGfrFhPt+eelv +yLk+k+++ +++l +vi ++d+yk+ePwd++         k
  Pav_sc0000350.1_g1100.1.mk  8 VPPGFRFHPTEEELVGYYLKRKINSLQIDL-DVIIDIDLYKIEPWDIQGwvvcrafkK 64
                                69****************************.99**************84455554440 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDHMESCVPP GFRFHPTEEE LVGYYLKRKI NSLQIDLDVI IDIDLYKIEP WDIQGWVVCR  60
AFKKPSPSHR QGFEALKHAY YIREHNSHAS SSNFGSEMHM VNPSQGFQYQ SFGLDQQDHL  120
ISNHIFMGNQ IIELPQLESP SISTSLTNKQ SVHEQQNNNI TTEHYDDQRS NMNSSDQHID  180
WRNLDSLLEV PLIPQNYEQE AQNHHLLGCF PGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-17NAC family protein